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HERO ID
7099744
Reference Type
Journal Article
Title
IRESpy: an XGBoost model for prediction of internal ribosome entry sites
Author(s)
Wang, J; Gribskov, M; ,
Year
2019
Is Peer Reviewed?
1
Journal
BMC Bioinformatics
EISSN:
1471-2105
Publisher
BMC
Location
LONDON
Language
English
PMID
31362694
DOI
10.1186/s12859-019-2999-7
Web of Science Id
WOS:000477931800002
Abstract
Internal ribosome entry sites (IRES) are segments of mRNA found in untranslated regions that can recruit the ribosome and initiate translation independently of the 5' cap-dependent translation initiation mechanism. IRES usually function when 5' cap-dependent translation initiation has been blocked or repressed. They have been widely found to play important roles in viral infections and cellular processes. However, a limited number of confirmed IRES have been reported due to the requirement for highly labor intensive, slow, and low efficiency laboratory experiments. Bioinformatics tools have been developed, but there is no reliable online tool.
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